Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YE282 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces; rectal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YE282
Accession NumberFMUV00000000.1
Gene Summary
Adenine Count
782033 bp
Thymine Count
763411 bp
Guanine Count
509700 bp
Cytosine Count
484338 bp
Genome Length
2539482 bp
Protein-coding Genes
2444 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN02910441_02038 | Not Available | + | 2068529 - 2069800 | 45069.0 |
| chorismate synthase | SAMN02910441_02039 | Not Available | + | 2069781 - 2070851 | 37981.9 |
| chorismate mutase / prephenate dehydratase | SAMN02910441_02040 | Not Available | + | 2070863 - 2071996 | 42426.5 |
| chap domain-containing protein | SAMN02910441_02041 | Not Available | - | 2072268 - 2073833 | 56053.3 |
| mannose-6-phosphate isomerase, cupin superfamily | SAMN02910441_02042 | Not Available | + | 2074481 - 2074912 | 16097.3 |
| hypothetical protein | SAMN02910441_02043 | Not Available | + | 2075091 - 2075245 | 5945.23 |
| type iv secretion system protein vird4 | SAMN02910441_02044 | Not Available | + | 2075246 - 2076522 | 47767.6 |
| helix-turn-helix domain-containing protein | SAMN02910441_02045 | Not Available | + | 2076515 - 2076778 | 9990.31 |
| sensor histidine kinase yesm | SAMN02910441_02046 | Not Available | - | 2076802 - 2078091 | 48894.4 |
| two component transcriptional regulator, lyttr family | SAMN02910441_02047 | Not Available | - | 2078094 - 2078801 | 27393.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
