Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YE282 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | feces; rectal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YE282
Accession NumberFMUV00000000.1
Gene Summary
Adenine Count
782033 bp
Thymine Count
763411 bp
Guanine Count
509700 bp
Cytosine Count
484338 bp
Genome Length
2539482 bp
Protein-coding Genes
2444 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| triosephosphate isomerase | SAMN02910441_00051 | Not Available | - | 51012 - 51779 | 27528.0 |
| phosphoglycerate kinase | SAMN02910441_00052 | Not Available | - | 51800 - 53008 | 42501.5 |
| trna (cytidine/uridine-2'-o-)-methyltransferase | SAMN02910441_00053 | Not Available | - | 53165 - 53680 | 19710.4 |
| hypothetical protein | SAMN02910441_00054 | Not Available | + | 53810 - 53992 | 6461.01 |
| transcriptional regulator, contains xre-family hth domain | SAMN02910441_00055 | Not Available | - | 54028 - 54405 | 14216.8 |
| hypothetical protein | SAMN02910441_00056 | Not Available | + | 54729 - 54911 | 6800.07 |
| g5 domain-containing protein | SAMN02910441_00057 | Not Available | - | 55458 - 56981 | 55051.8 |
| s-ribosylhomocysteine lyase /quorum-sensing autoinducer 2 (ai-2) synthesis protein luxs | SAMN02910441_00058 | Not Available | - | 57151 - 57606 | 17296.7 |
| lyzozyme m1 (1,4-beta-n-acetylmuramidase), gh25 family | SAMN02910441_00059 | Not Available | - | 57641 - 58546 | 33342.6 |
| hypothetical protein | SAMN02910441_00060 | Not Available | + | 58879 - 59169 | 10830.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
