Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Dna polymerase i | SAMN04487832_102189 | Not Available | + | 599124 - 601112 | 74565.4 |
| dna binding domain-containing protein, excisionase family | SAMN04487832_102190 | Not Available | + | 601214 - 601480 | 10134.2 |
| dna binding domain-containing protein, excisionase family | SAMN04487832_102191 | Not Available | + | 601581 - 601811 | 8653.37 |
| hypothetical protein | SAMN04487832_102192 | Not Available | + | 601786 - 601995 | 8406.52 |
| Site-specific integrase | SAMN04487832_102193 | Not Available | + | 601995 - 603242 | 48347.4 |
| Attr | Not Available | Not Available | + | 603616 - 603647 | Not Available |
| Transposase | SAMN04487832_1081 | Not Available | - | 1996274 - 1996508 | 9167.99 |
| hypothetical protein | SAMN04487832_1082 | Not Available | + | 1996688 - 1997095 | 14519.6 |
| transposon-encoded protein tnpw | SAMN04487832_1083 | Not Available | + | 1997255 - 1997458 | 7469.76 |
| Attl | Not Available | Not Available | + | 1997477 - 1997488 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.