Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_1042 | Not Available | - | 1064652 - 1066034 | 50883.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_1043 | Not Available | - | 1066021 - 1066575 | 21841.5 |
| hypothetical protein | SAMN04487832_1044 | Not Available | + | 1066774 - 1068462 | 62923.4 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | SAMN04487832_1045 | Not Available | - | 1068652 - 1069851 | 44701.8 |
| dethiobiotin synthetase | SAMN04487832_1046 | Not Available | - | 1069848 - 1070540 | 24995.2 |
| biotin synthase | SAMN04487832_1047 | Not Available | - | 1070537 - 1071508 | 35939.8 |
| biotin transport system substrate-specific component | SAMN04487832_1048 | Not Available | - | 1071511 - 1072209 | 25157.5 |
| trna nucleotidyltransferase (cca-adding enzyme) | SAMN04487832_1049 | Not Available | - | 1072542 - 1073324 | 29733.7 |
| wyl domain-containing protein | SAMN04487832_10410 | Not Available | - | 1073302 - 1074309 | 39023.7 |
| wyl domain-containing protein | SAMN04487832_10411 | Not Available | - | 1074293 - 1075567 | 49439.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.