Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dnad and phage-associated domain-containing protein | SAMN04487832_103254 | Not Available | - | 1054561 - 1055541 | 37080.3 |
| hd domain-containing protein | SAMN04487832_103255 | Not Available | - | 1056121 - 1056558 | 16631.8 |
| hypothetical protein | SAMN04487832_103256 | Not Available | + | 1056779 - 1057314 | 19927.8 |
| hypothetical protein | SAMN04487832_103257 | Not Available | + | 1057470 - 1057716 | 8490.53 |
| atp-binding cassette, subfamily f, uup | SAMN04487832_103258 | Not Available | - | 1057841 - 1059625 | 67670.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_103259 | Not Available | + | 1060193 - 1060753 | 21080.1 |
| hypothetical protein | SAMN04487832_103260 | Not Available | + | 1060766 - 1062001 | 46267.4 |
| hypothetical protein | SAMN04487832_103261 | Not Available | - | 1062063 - 1063379 | 48993.0 |
| Trna-met | Not Available | Not Available | + | 1063591 - 1063667 | Not Available |
| hypothetical protein | SAMN04487832_1041 | Not Available | - | 1064076 - 1064380 | 10323.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.