Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_103244 | Not Available | + | 1044614 - 1045804 | 43768.6 |
| rna-splicing ligase rtcb, repairs trna damage | SAMN04487832_103245 | Not Available | + | 1046101 - 1047306 | 44773.1 |
| hypothetical protein | SAMN04487832_103246 | Not Available | + | 1047360 - 1047527 | 6677.99 |
| hypothetical protein | SAMN04487832_103247 | Not Available | - | 1047677 - 1048249 | 20916.9 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04487832_103248 | Not Available | - | 1048287 - 1049012 | 27730.6 |
| hypothetical protein | SAMN04487832_103249 | Not Available | + | 1049262 - 1050428 | 43930.6 |
| atpase, p-type (transporting), had superfamily, subfamily ic/heavy metal translocating p-type atpase | SAMN04487832_103250 | Not Available | - | 1050497 - 1052575 | 75766.8 |
| hypothetical protein | SAMN04487832_103251 | Not Available | - | 1052647 - 1052928 | 10094.0 |
| copper chaperone copz | SAMN04487832_103252 | Not Available | + | 1053264 - 1053518 | 9461.48 |
| dna replication protein dnac | SAMN04487832_103253 | Not Available | - | 1053577 - 1054548 | 37259.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.