Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type transport system involved in multi-copper enzyme maturation, permease component | SAMN04487832_103234 | Not Available | + | 1031822 - 1034131 | 87137.2 |
| Trna-arg | Not Available | Not Available | + | 1034380 - 1034456 | Not Available |
| hypothetical protein | SAMN04487832_103236 | Not Available | - | 1034609 - 1035796 | 43897.9 |
| hypothetical protein | SAMN04487832_103237 | Not Available | - | 1035799 - 1036650 | 31970.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_103238 | Not Available | - | 1036653 - 1037225 | 21783.2 |
| histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase | SAMN04487832_103239 | Not Available | + | 1037668 - 1039482 | 69408.2 |
| nad-dependent glycerol-3-phosphate dehydrogenase n-terminus | SAMN04487832_103240 | Not Available | + | 1039484 - 1040563 | 39633.2 |
| acyltransferase | SAMN04487832_103241 | Not Available | + | 1040627 - 1043257 | 97968.4 |
| 5' nucleotidase, deoxy (pyrimidine), type c protein (nt5c) | SAMN04487832_103242 | Not Available | + | 1043254 - 1043853 | 23244.3 |
| phosphatidylglycerophosphate synthase | SAMN04487832_103243 | Not Available | + | 1043868 - 1044617 | 28059.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.