Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_103224 | Not Available | - | 1016062 - 1016739 | 25379.5 |
| leucyl-trna synthetase | SAMN04487832_103225 | Not Available | + | 1017026 - 1019425 | 90203.4 |
| putative abc transport system permease protein | SAMN04487832_103226 | Not Available | + | 1019539 - 1022544 | 110711.0 |
| tigr02452 family protein | SAMN04487832_103227 | Not Available | + | 1022760 - 1023563 | 29091.4 |
| uncharacterized protein, pyridoxamine 5'-phosphate oxidase (pnpox-like) family | SAMN04487832_103228 | Not Available | + | 1023663 - 1024058 | 14447.4 |
| hypothetical protein | SAMN04487832_103229 | Not Available | + | 1024438 - 1026342 | 71280.1 |
| arac-type dna-binding protein | SAMN04487832_103230 | Not Available | + | 1026506 - 1027258 | 28845.7 |
| glycosyl hydrolases family 16 | SAMN04487832_103231 | Not Available | + | 1028852 - 1030336 | 56818.2 |
| gntr family transcriptional regulator | SAMN04487832_103232 | Not Available | + | 1030547 - 1030924 | 13927.5 |
| abc-2 type transport system atp-binding protein | SAMN04487832_103233 | Not Available | + | 1030921 - 1031850 | 35084.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.