Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_103214 | Not Available | - | 1001203 - 1002315 | 41195.1 |
| cellulase (glycosyl hydrolase family 5) | SAMN04487832_103215 | Not Available | + | 1002599 - 1003549 | 36844.2 |
| hypothetical protein | SAMN04487832_103216 | Not Available | - | 1003636 - 1003992 | 13935.8 |
| dna-binding transcriptional regulator, laci/purr family | SAMN04487832_103217 | Not Available | - | 1004011 - 1006251 | 83714.3 |
| hypothetical protein | SAMN04487832_103218 | Not Available | + | 1007231 - 1008547 | 47472.0 |
| hypothetical protein | SAMN04487832_103219 | Not Available | - | 1008731 - 1009225 | 15640.8 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04487832_103220 | Not Available | + | 1009536 - 1010207 | 25282.7 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04487832_103221 | Not Available | + | 1010220 - 1012130 | 74459.6 |
| signal transduction histidine kinase | SAMN04487832_103222 | Not Available | + | 1012193 - 1014115 | 73493.5 |
| ca-activated chloride channel family protein | SAMN04487832_103223 | Not Available | - | 1014356 - 1016062 | 61685.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.