Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| indole-3-glycerol phosphate synthase | SAMN04487832_103204 | Not Available | + | 990050 - 990832 | 28765.7 |
| phosphoribosylanthranilate isomerase | SAMN04487832_103205 | Not Available | + | 990829 - 991425 | 22055.2 |
| tryptophan synthase beta chain | SAMN04487832_103206 | Not Available | + | 991439 - 992629 | 43283.6 |
| tryptophan synthase, alpha chain | SAMN04487832_103207 | Not Available | + | 992622 - 993401 | 27746.3 |
| chorismate mutase | SAMN04487832_103208 | Not Available | + | 993530 - 993973 | 16343.7 |
| homoserine dehydrogenase | SAMN04487832_103209 | Not Available | + | 993995 - 995188 | 42817.1 |
| phenylacetate-coa ligase | SAMN04487832_103210 | Not Available | - | 995449 - 996684 | 46177.6 |
| indolepyruvate ferredoxin oxidoreductase beta subunit | SAMN04487832_103211 | Not Available | - | 996699 - 997271 | 20466.2 |
| indolepyruvate ferredoxin oxidoreductase alpha subunit | SAMN04487832_103212 | Not Available | - | 997268 - 999079 | 65026.7 |
| sodium/proline symporter | SAMN04487832_103213 | Not Available | + | 999434 - 1000975 | 55337.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.