Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative holliday junction resolvase | SAMN04487832_103173 | Not Available | + | 960552 - 960980 | 15698.9 |
| hypothetical protein | SAMN04487832_103174 | Not Available | - | 960973 - 961146 | 5752.14 |
| trna (cytidine/uridine-2'-o-)-methyltransferase | SAMN04487832_103175 | Not Available | + | 961233 - 961730 | 19095.5 |
| edd domain protein, degv family | SAMN04487832_103176 | Not Available | + | 962106 - 962978 | 32524.3 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN04487832_103177 | Not Available | - | 963845 - 965245 | 52732.2 |
| hypothetical protein | SAMN04487832_103178 | Not Available | - | 965805 - 966608 | 26845.3 |
| hypothetical protein | SAMN04487832_103179 | Not Available | + | 967248 - 968225 | 37012.2 |
| chromosome partitioning atpase, mrp family, contains fe-s cluster | SAMN04487832_103180 | Not Available | + | 968447 - 969286 | 30021.5 |
| arac-type dna-binding protein | SAMN04487832_103181 | Not Available | - | 969638 - 970495 | 32389.2 |
| fha domain-containing protein | SAMN04487832_103182 | Not Available | + | 971064 - 971480 | 15790.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.