Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphate starvation-inducible protein phoh | SAMN04487832_103163 | Not Available | - | 949841 - 950812 | 35906.4 |
| cyth domain-containing protein | SAMN04487832_103164 | Not Available | - | 950812 - 951342 | 20325.3 |
| hypothetical protein | SAMN04487832_103165 | Not Available | - | 951519 - 952277 | 28037.2 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN04487832_103166 | Not Available | + | 952555 - 953592 | 36666.7 |
| hypothetical protein | SAMN04487832_103167 | Not Available | + | 953811 - 954536 | 27129.5 |
| hypothetical protein | SAMN04487832_103168 | Not Available | + | 955185 - 955735 | 20082.3 |
| leucine rich repeat-containing protein | SAMN04487832_103169 | Not Available | + | 956576 - 957592 | 37133.3 |
| leucine rich repeat-containing protein | SAMN04487832_103170 | Not Available | + | 957611 - 958408 | 29658.4 |
| dihydroorotate dehydrogenase electron transfer subunit | SAMN04487832_103171 | Not Available | + | 958518 - 959288 | 27665.6 |
| dihydroorotate dehydrogenase (nad+) catalytic subunit | SAMN04487832_103172 | Not Available | + | 959288 - 960199 | 31731.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.