Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_103143 | Not Available | - | 932503 - 933546 | 40090.6 |
| trna a37 threonylcarbamoyladenosine dehydratase | SAMN04487832_103144 | Not Available | + | 933796 - 934551 | 27997.4 |
| molybdopterin or thiamine biosynthesis adenylyltransferase | SAMN04487832_103145 | Not Available | - | 934538 - 935350 | 29236.5 |
| rhodanese-related sulfurtransferase | SAMN04487832_103146 | Not Available | + | 935376 - 935678 | 10990.1 |
| hypothetical protein | SAMN04487832_103147 | Not Available | + | 935842 - 935967 | 4877.17 |
| dna-binding transcriptional regulator, lysr family | SAMN04487832_103148 | Not Available | + | 936044 - 936964 | 35271.2 |
| nitrogenase molybdenum-iron protein alpha chain | SAMN04487832_103149 | Not Available | + | 937117 - 938718 | 59663.9 |
| nitrogenase molybdenum-iron protein beta chain | SAMN04487832_103150 | Not Available | + | 938721 - 940064 | 49101.6 |
| predicted fe-mo cluster-binding protein, nifx family | SAMN04487832_103151 | Not Available | + | 940077 - 940442 | 13745.2 |
| nitrogen fixation protein nifb | SAMN04487832_103152 | Not Available | + | 940418 - 941293 | 32043.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.