Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase | SAMN04487832_103133 | Not Available | - | 913779 - 915866 | 77040.2 |
| ctp synthase | SAMN04487832_103134 | Not Available | - | 915870 - 917471 | 59321.6 |
| ammonium transporter, amt family | SAMN04487832_103135 | Not Available | - | 917561 - 919645 | 74850.3 |
| glutamate synthase (ferredoxin) | SAMN04487832_103136 | Not Available | + | 919801 - 924327 | 165059.0 |
| glutamate synthase (nadph/nadh) small chain | SAMN04487832_103137 | Not Available | + | 924331 - 925815 | 54287.0 |
| glutamine synthetase | SAMN04487832_103138 | Not Available | + | 925827 - 927104 | 47430.8 |
| response regulator receiver and antar domain protein | SAMN04487832_103139 | Not Available | + | 927117 - 927698 | 22093.9 |
| amidophosphoribosyltransferase | SAMN04487832_103140 | Not Available | + | 927712 - 929133 | 51545.5 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04487832_103141 | Not Available | - | 929475 - 930542 | 41286.2 |
| coth protein | SAMN04487832_103142 | Not Available | - | 930599 - 932200 | 59978.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.