Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribose-phosphate pyrophosphokinase | SAMN04487832_103113 | Not Available | + | 880755 - 881900 | 42686.1 |
| dcmp deaminase | SAMN04487832_103114 | Not Available | - | 881952 - 882434 | 17906.4 |
| nifu homolog involved in fe-s cluster formation | SAMN04487832_103115 | Not Available | + | 882686 - 883378 | 24665.7 |
| gggtgrt protein | SAMN04487832_103116 | Not Available | + | 883393 - 884391 | 35355.5 |
| lysophospholipase l1 | SAMN04487832_103117 | Not Available | - | 884576 - 885664 | 39825.8 |
| beta-glucosidase | SAMN04487832_103118 | Not Available | + | 886074 - 888611 | 94006.2 |
| alpha/beta hydrolase family protein | SAMN04487832_103119 | Not Available | + | 888769 - 889596 | 30064.4 |
| transposase inso and inactivated derivatives | SAMN04487832_103120 | Not Available | - | 889844 - 890515 | 26524.8 |
| transposase and inactivated derivatives | SAMN04487832_103121 | Not Available | - | 890737 - 891420 | 26492.9 |
| abc-type phosphate transport system, substrate-binding protein | SAMN04487832_103122 | Not Available | - | 891543 - 893258 | 65281.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.