Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_103103 | Not Available | - | 869160 - 870734 | 58468.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_103104 | Not Available | - | 870721 - 871275 | 21474.5 |
| hypothetical protein | SAMN04487832_103105 | Not Available | - | 871543 - 872439 | 33554.3 |
| 4fe-4s dicluster domain-containing protein | SAMN04487832_103106 | Not Available | - | 872795 - 873589 | 29456.5 |
| pyrroline-5-carboxylate reductase | SAMN04487832_103107 | Not Available | + | 873752 - 874558 | 28365.2 |
| hypothetical protein | SAMN04487832_103108 | Not Available | + | 874615 - 875193 | 20445.3 |
| uncharacterized membrane protein yesl | SAMN04487832_103109 | Not Available | + | 875241 - 876161 | 34623.7 |
| alanine or glycine:cation symporter, agcs family | SAMN04487832_103110 | Not Available | - | 876267 - 877685 | 50271.4 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487832_103111 | Not Available | - | 877813 - 879723 | 72388.8 |
| inorganic pyrophosphatase | SAMN04487832_103112 | Not Available | + | 880151 - 880684 | 20532.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.