Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spermidine synthase | SAMN04487832_10372 | Not Available | + | 833740 - 834591 | 33032.3 |
| agmatinase | SAMN04487832_10373 | Not Available | + | 834581 - 835432 | 31312.8 |
| protein of unknown function | SAMN04487832_10374 | Not Available | + | 835445 - 836092 | 24334.2 |
| hypothetical protein | SAMN04487832_10375 | Not Available | + | 836117 - 836929 | 30594.3 |
| protein of unknown function | SAMN04487832_10376 | Not Available | + | 836962 - 837402 | 16106.2 |
| carboxynorspermidine dehydrogenase | SAMN04487832_10377 | Not Available | + | 837492 - 838694 | 44930.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487832_10378 | Not Available | - | 838779 - 839915 | 43561.7 |
| carboxynorspermidine decarboxylase | SAMN04487832_10379 | Not Available | + | 840019 - 841146 | 42193.5 |
| l-amino acid n-acyltransferase ynca | SAMN04487832_10380 | Not Available | + | 841163 - 841648 | 18388.1 |
| hypothetical protein | SAMN04487832_10381 | Not Available | + | 841742 - 842554 | 30684.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.