Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase | SAMN04487832_10362 | Not Available | + | 817885 - 819153 | 45387.6 |
| orotidine-5'-phosphate decarboxylase | SAMN04487832_10363 | Not Available | + | 819161 - 820087 | 34130.9 |
| carbamoyl-phosphate synthase small subunit | SAMN04487832_10364 | Not Available | + | 820195 - 821295 | 40451.0 |
| carbamoyl-phosphate synthase large subunit | SAMN04487832_10365 | Not Available | + | 821405 - 824596 | 117511.0 |
| cd2+/zn2+-exporting atpase | SAMN04487832_10366 | Not Available | - | 824771 - 827782 | 109515.0 |
| sigma-70, region 4 | SAMN04487832_10367 | Not Available | + | 828140 - 828772 | 24089.9 |
| hypothetical protein | SAMN04487832_10368 | Not Available | + | 828765 - 830309 | 58487.5 |
| s-adenosylmethionine decarboxylase | SAMN04487832_10369 | Not Available | + | 830769 - 831551 | 29480.9 |
| arginine/lysine/ornithine decarboxylase | SAMN04487832_10370 | Not Available | + | 831532 - 832977 | 53205.2 |
| hypothetical protein | SAMN04487832_10371 | Not Available | + | 833271 - 833720 | 16629.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.