Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily b | SAMN04487832_10352 | Not Available | + | 806093 - 807832 | 63594.4 |
| aspartyl-trna synthetase | SAMN04487832_10353 | Not Available | - | 807888 - 809663 | 67121.4 |
| histidyl-trna synthetase | SAMN04487832_10354 | Not Available | - | 809666 - 811006 | 50524.8 |
| methylglyoxal synthase | SAMN04487832_10355 | Not Available | - | 811096 - 811497 | 14567.8 |
| septum site-determining protein mind | SAMN04487832_10356 | Not Available | - | 811535 - 812272 | 26370.3 |
| shikimate kinase | SAMN04487832_10357 | Not Available | - | 812452 - 812949 | 18553.7 |
| hypothetical protein | SAMN04487832_10358 | Not Available | + | 813074 - 814033 | 36422.7 |
| acetyltransferase (gnat) family protein | SAMN04487832_10359 | Not Available | + | 814030 - 814485 | 17608.8 |
| beta-xylosidase | SAMN04487832_10360 | Not Available | + | 814653 - 817040 | 87075.8 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN04487832_10361 | Not Available | + | 817323 - 817859 | 19865.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.