Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| redox-sensing transcriptional repressor | SAMN04487832_10342 | Not Available | - | 793346 - 793984 | 23776.6 |
| isocitrate dehydrogenase (nadp) | SAMN04487832_10343 | Not Available | - | 794016 - 795227 | 45863.7 |
| hypothetical protein | SAMN04487832_10344 | Not Available | - | 795478 - 795672 | 7033.03 |
| aconitase | SAMN04487832_10345 | Not Available | - | 795689 - 797626 | 68966.4 |
| protein-s-isoprenylcysteine o-methyltransferase ste14 | SAMN04487832_10346 | Not Available | + | 797811 - 798482 | 25686.4 |
| diaminopimelate decarboxylase | SAMN04487832_10347 | Not Available | - | 798530 - 799825 | 47203.4 |
| gtp-binding protein | SAMN04487832_10348 | Not Available | - | 799829 - 800455 | 24002.6 |
| atp-dependent lon protease | SAMN04487832_10349 | Not Available | - | 800477 - 802819 | 86480.9 |
| udp-n-acetylglucosamine/udp-n- acetylgalactosaminediphosphorylase | SAMN04487832_10350 | Not Available | + | 803066 - 804298 | 46236.4 |
| atp-binding cassette, subfamily b | SAMN04487832_10351 | Not Available | + | 804369 - 806096 | 63062.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.