Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase / fumarate reductase flavoprotein subunit | SAMN04487832_10332 | Not Available | - | 782688 - 784292 | 57451.2 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | SAMN04487832_10333 | Not Available | - | 784306 - 784989 | 25664.2 |
| nad(p)h-flavin reductase | SAMN04487832_10334 | Not Available | - | 785004 - 785831 | 30712.9 |
| 4fe-4s dicluster domain-containing protein | SAMN04487832_10335 | Not Available | - | 785831 - 786850 | 38073.5 |
| 4fe-4s dicluster domain-containing protein | SAMN04487832_10336 | Not Available | - | 786850 - 787821 | 36566.5 |
| coenzyme f420-reducing hydrogenase, delta subunit | SAMN04487832_10337 | Not Available | - | 787806 - 788246 | 16694.2 |
| heterodisulfide reductase subunit a | SAMN04487832_10338 | Not Available | - | 788237 - 790228 | 71665.6 |
| heterodisulfide reductase subunit c | SAMN04487832_10339 | Not Available | - | 790241 - 790624 | 14417.7 |
| heterodisulfide reductase subunit b | SAMN04487832_10340 | Not Available | - | 790617 - 791414 | 29165.8 |
| fumarase, class ii | SAMN04487832_10341 | Not Available | - | 791439 - 792815 | 49968.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.