Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formate c-acetyltransferase | SAMN04487832_10312 | Not Available | + | 760720 - 762834 | 79666.2 |
| hypothetical protein | SAMN04487832_10313 | Not Available | + | 762834 - 763052 | 7582.61 |
| glycine radical | SAMN04487832_10314 | Not Available | + | 763077 - 763316 | 9058.66 |
| methionyl-trna synthetase | SAMN04487832_10315 | Not Available | + | 763487 - 765460 | 74630.6 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | SAMN04487832_10316 | Not Available | - | 765806 - 766306 | 18587.9 |
| ribonucleoside-triphosphate reductase class iii catalytic subunit | SAMN04487832_10317 | Not Available | - | 766316 - 768637 | 86695.9 |
| gdsl-like lipase/acylhydrolase | SAMN04487832_10318 | Not Available | - | 768880 - 769728 | 31179.8 |
| ssra-binding protein | SAMN04487832_10319 | Not Available | + | 770007 - 770471 | 17931.0 |
| ribosomal protein s18 acetylase rimi | SAMN04487832_10320 | Not Available | + | 770481 - 770924 | 17011.6 |
| methyltransferase domain-containing protein | SAMN04487832_10321 | Not Available | + | 770998 - 771594 | 22258.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.