Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_102310 | Not Available | + | 734434 - 735192 | 28928.0 |
| hypothetical protein | SAMN04487832_102311 | Not Available | + | 735250 - 737508 | 81038.2 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | SAMN04487832_102312 | Not Available | + | 737529 - 737930 | 14372.2 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | SAMN04487832_102313 | Not Available | + | 737944 - 738978 | 37635.1 |
| leader peptidase (prepilin peptidase) / n-methyltransferase | SAMN04487832_102314 | Not Available | - | 739044 - 739883 | 30603.5 |
| type iv pilus assembly protein pilb | SAMN04487832_102315 | Not Available | + | 740006 - 741685 | 60386.9 |
| twitching motility protein pilt | SAMN04487832_102316 | Not Available | + | 741720 - 742808 | 40448.9 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | SAMN04487832_102317 | Not Available | + | 743284 - 743772 | 16622.7 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | SAMN04487832_102318 | Not Available | + | 744032 - 744592 | 20728.5 |
| choice-of-anchor a domain-containing protein | SAMN04487832_1031 | Not Available | - | 745146 - 747261 | 76246.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.