Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hsp20 family protein | SAMN04487832_102300 | Not Available | + | 720720 - 721142 | 16121.9 |
| cys-trna(pro)/cys-trna(cys) deacylase | SAMN04487832_102301 | Not Available | - | 721187 - 721666 | 17561.5 |
| ring finger family protein 1 | SAMN04487832_102302 | Not Available | - | 721884 - 722852 | 36126.1 |
| transcriptional regulator, contains xre-family hth domain | SAMN04487832_102303 | Not Available | - | 722962 - 723927 | 35399.6 |
| hypothetical protein | SAMN04487832_102304 | Not Available | + | 724290 - 725006 | 25680.2 |
| bnr/asp-box repeat-containing protein | SAMN04487832_102305 | Not Available | - | 725122 - 727869 | 98186.1 |
| asparagine synthase (glutamine-hydrolysing) | SAMN04487832_102306 | Not Available | - | 728163 - 729986 | 69289.6 |
| tigr00266 family protein | SAMN04487832_102307 | Not Available | + | 730396 - 731070 | 24019.2 |
| type iv pilus assembly protein pilc | SAMN04487832_102308 | Not Available | + | 731525 - 732727 | 44797.3 |
| type iv pilus assembly protein pilm | SAMN04487832_102309 | Not Available | + | 732752 - 734416 | 62087.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.