Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpa | SAMN04487832_102290 | Not Available | + | 704480 - 706795 | 86341.8 |
| cohesin domain-containing protein | SAMN04487832_102291 | Not Available | + | 706792 - 707469 | 24350.2 |
| chorismate mutase | SAMN04487832_102292 | Not Available | + | 707880 - 709001 | 41643.8 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | SAMN04487832_102293 | Not Available | + | 709025 - 711397 | 84360.0 |
| hypothetical protein | SAMN04487832_102294 | Not Available | + | 711486 - 711860 | 14488.9 |
| hypothetical protein | SAMN04487832_102295 | Not Available | + | 711875 - 712381 | 19331.2 |
| transcriptional regulator, tetr family | SAMN04487832_102296 | Not Available | - | 712465 - 713070 | 23129.9 |
| hypothetical protein | SAMN04487832_102297 | Not Available | + | 713431 - 715524 | 76565.0 |
| putative membrane protein | SAMN04487832_102298 | Not Available | + | 715569 - 718202 | 88924.0 |
| phosphate:na+ symporter | SAMN04487832_102299 | Not Available | - | 718569 - 720368 | 65206.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.