Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN04487832_102280 | Not Available | + | 694256 - 695122 | 32133.2 |
| hypothetical protein | SAMN04487832_102281 | Not Available | + | 695119 - 695889 | 28343.3 |
| energy-coupling factor transport system atp-binding protein | SAMN04487832_102282 | Not Available | + | 695902 - 696744 | 31351.9 |
| hypothetical protein | SAMN04487832_102283 | Not Available | + | 696759 - 696986 | 8335.19 |
| energy-coupling factor transport system atp-binding protein | SAMN04487832_102284 | Not Available | + | 697006 - 697869 | 32441.4 |
| energy-coupling factor transport system permease protein | SAMN04487832_102285 | Not Available | + | 697871 - 698677 | 30299.4 |
| uncharacterized membrane protein yfho | SAMN04487832_102286 | Not Available | + | 698697 - 701516 | 105756.0 |
| trna pseudouridine38-40 synthase | SAMN04487832_102287 | Not Available | + | 701476 - 702234 | 28265.6 |
| hypothetical protein | SAMN04487832_102288 | Not Available | + | 702275 - 703441 | 43346.0 |
| hypothetical protein | SAMN04487832_102289 | Not Available | + | 703501 - 704394 | 33315.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.