Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyl transferase subunit beta | SAMN04487832_102270 | Not Available | + | 685575 - 686435 | 32164.7 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | SAMN04487832_102271 | Not Available | + | 686439 - 687302 | 31853.2 |
| acyl carrier protein | SAMN04487832_102272 | Not Available | + | 687302 - 687538 | 8783.09 |
| [fefe] hydrogenase h-cluster maturation gtpase hydf | SAMN04487832_102273 | Not Available | - | 687633 - 688829 | 43194.3 |
| holliday junction endonuclease ruvc | SAMN04487832_102274 | Not Available | + | 689055 - 689567 | 18829.8 |
| holliday junction dna helicase subunit ruva | SAMN04487832_102275 | Not Available | + | 689617 - 690240 | 21804.3 |
| sseb protein n-terminal domain-containing protein | SAMN04487832_102276 | Not Available | + | 690346 - 691077 | 28248.6 |
| holliday junction dna helicase subunit ruvb | SAMN04487832_102277 | Not Available | + | 691114 - 692172 | 38529.7 |
| hypothetical protein | SAMN04487832_102278 | Not Available | + | 692176 - 692703 | 19967.7 |
| phosphoglucosamine mutase | SAMN04487832_102279 | Not Available | + | 692886 - 694238 | 48432.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.