Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (guanine37-n1)-methyltransferase | SAMN04487832_102219 | Not Available | + | 627332 - 628030 | 26387.7 |
| phosphocarrier protein | SAMN04487832_102220 | Not Available | + | 628510 - 628782 | 9903.92 |
| stage iv sporulation protein b | SAMN04487832_102221 | Not Available | - | 628836 - 630026 | 41447.6 |
| hypothetical protein | SAMN04487832_102222 | Not Available | - | 630281 - 631792 | 56060.6 |
| hypothetical protein | SAMN04487832_102223 | Not Available | - | 631800 - 633188 | 51548.5 |
| abc-2 type transport system atp-binding protein | SAMN04487832_102224 | Not Available | + | 633495 - 634235 | 27118.2 |
| abc-2 type transport system permease protein | SAMN04487832_102225 | Not Available | + | 634222 - 635589 | 49353.9 |
| protein of unknown function | SAMN04487832_102226 | Not Available | + | 636048 - 637115 | 40301.1 |
| helix-turn-helix | SAMN04487832_102227 | Not Available | + | 637190 - 637630 | 16788.9 |
| hypothetical protein | SAMN04487832_102228 | Not Available | - | 637727 - 637951 | 8585.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.