Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_102209 | Not Available | + | 618047 - 618490 | 15614.8 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04487832_102210 | Not Available | + | 618554 - 619243 | 25437.6 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04487832_102211 | Not Available | + | 619236 - 620453 | 45072.4 |
| fucose permease | SAMN04487832_102212 | Not Available | + | 620500 - 621657 | 41643.7 |
| hypothetical protein | SAMN04487832_102213 | Not Available | - | 621732 - 622511 | 28460.4 |
| abrb family transcriptional regulator, stage v sporulation protein t | SAMN04487832_102214 | Not Available | + | 622728 - 623267 | 19952.7 |
| helix-turn-helix | SAMN04487832_102215 | Not Available | - | 623320 - 623922 | 22885.6 |
| adenylosuccinate lyase | SAMN04487832_102216 | Not Available | + | 624382 - 625821 | 54452.6 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04487832_102217 | Not Available | + | 626031 - 626636 | 22288.8 |
| 16s rrna processing protein rimm | SAMN04487832_102218 | Not Available | + | 626829 - 627332 | 19119.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.