Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| predicted oxidoreductase | SAMN04487832_102199 | Not Available | - | 607009 - 607938 | 35392.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04487832_102200 | Not Available | + | 608113 - 609066 | 35244.5 |
| two-component system, ompr family, response regulator vicr | SAMN04487832_102201 | Not Available | + | 609163 - 609852 | 26270.6 |
| signal transduction histidine kinase | SAMN04487832_102202 | Not Available | + | 609849 - 610985 | 41604.8 |
| putative abc transport system atp-binding protein | SAMN04487832_102203 | Not Available | + | 611047 - 611808 | 28120.7 |
| abc-type transport system, involved in lipoprotein release, permease component | SAMN04487832_102204 | Not Available | + | 611818 - 614166 | 87032.0 |
| hypothetical protein | SAMN04487832_102205 | Not Available | + | 614658 - 615053 | 14611.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04487832_102206 | Not Available | + | 615100 - 616560 | 54721.3 |
| giy-yig catalytic domain-containing protein | SAMN04487832_102207 | Not Available | + | 616581 - 617378 | 31008.7 |
| predicted acetyltransferase | SAMN04487832_102208 | Not Available | + | 617391 - 617891 | 19438.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.