Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5-methylcytosine-specific restriction enzyme a | SAMN04487832_102175 | Not Available | - | 582100 - 582492 | 15358.8 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN04487832_102176 | Not Available | - | 583377 - 585125 | 65219.5 |
| hypothetical protein | SAMN04487832_102177 | Not Available | + | 585719 - 585970 | 9703.56 |
| phage-related protein | SAMN04487832_102178 | Not Available | + | 586990 - 588675 | 60693.7 |
| pld-like domain-containing protein | SAMN04487832_102179 | Not Available | - | 588679 - 589809 | 43706.2 |
| protein-tyrosine phosphatase | SAMN04487832_102194 | Not Available | + | 603617 - 604078 | 17189.6 |
| hypothetical protein | SAMN04487832_102195 | Not Available | + | 604075 - 604260 | 6978.14 |
| 16s rrna pseudouridine516 synthase | SAMN04487832_102196 | Not Available | + | 604260 - 604874 | 23496.3 |
| putative efflux protein, mate family | SAMN04487832_102197 | Not Available | + | 604979 - 606328 | 48166.3 |
| transcriptional regulator, tetr family | SAMN04487832_102198 | Not Available | - | 606398 - 607009 | 23090.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.