Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_102135 | Not Available | + | 530343 - 530564 | 8624.18 |
| acetyltransferase (gnat) family protein | SAMN04487832_102136 | Not Available | + | 530686 - 530955 | 10458.5 |
| endo-1,4-beta-xylanase | SAMN04487832_102137 | Not Available | - | 531052 - 533067 | 74270.4 |
| prolyl-trna synthetase | SAMN04487832_102138 | Not Available | + | 533691 - 535133 | 54024.4 |
| hypothetical protein | SAMN04487832_102139 | Not Available | + | 535251 - 536210 | 35732.0 |
| asc-1 homology (asch) domain-containing protein | SAMN04487832_102140 | Not Available | + | 536226 - 536564 | 13082.6 |
| hypothetical protein | SAMN04487832_102141 | Not Available | + | 536586 - 537242 | 24392.9 |
| lectin c-type domain-containing protein | SAMN04487832_102142 | Not Available | + | 537489 - 542954 | 197198.0 |
| lpxtg-site transpeptidase (sortase) family protein | SAMN04487832_102143 | Not Available | + | 543042 - 543509 | 17362.7 |
| lactoylglutathione lyase | SAMN04487832_102144 | Not Available | + | 543589 - 543972 | 14307.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.