Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aryl-phospho-beta-d-glucosidase bglc, gh1 family | SAMN04487832_102115 | Not Available | + | 508051 - 509967 | 69802.0 |
| hypothetical protein | SAMN04487832_102116 | Not Available | + | 510044 - 510253 | 7932.3 |
| polyphosphate:nucleotide phosphotransferase, ppk2 family | SAMN04487832_102117 | Not Available | + | 510244 - 511299 | 41666.5 |
| hypothetical protein | SAMN04487832_102118 | Not Available | - | 511641 - 512789 | 40217.9 |
| hypothetical protein | SAMN04487832_102119 | Not Available | - | 512890 - 513561 | 24036.2 |
| beta-glucanase, gh16 family | SAMN04487832_102120 | Not Available | - | 513690 - 515114 | 52420.3 |
| protein n-acetyltransferase, rimj/riml family | SAMN04487832_102121 | Not Available | - | 515111 - 515632 | 19811.6 |
| fructose-bisphosphate aldolase, class ii | SAMN04487832_102122 | Not Available | - | 515846 - 516709 | 30260.5 |
| zinc-ribbon domain-containing protein | SAMN04487832_102123 | Not Available | - | 516866 - 517330 | 17106.2 |
| glycosyl hydrolases family 11 | SAMN04487832_102124 | Not Available | - | 517555 - 520647 | 114552.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.