Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s-ribosylhomocysteine lyase /quorum-sensing autoinducer 2 (ai-2) synthesis protein luxs | SAMN04487832_102105 | Not Available | - | 500136 - 500612 | 18111.5 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN04487832_102106 | Not Available | - | 500615 - 501472 | 31542.6 |
| hypothetical protein | SAMN04487832_102107 | Not Available | - | 501469 - 502272 | 29633.1 |
| alpha-ribazole phosphatase | SAMN04487832_102108 | Not Available | - | 502323 - 502976 | 24748.6 |
| transcriptional regulator, contains xre-family hth domain | SAMN04487832_102109 | Not Available | + | 503255 - 503986 | 27277.4 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit gamma | SAMN04487832_102110 | Not Available | - | 504381 - 504914 | 19092.4 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit beta | SAMN04487832_102111 | Not Available | - | 504914 - 505684 | 27634.3 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit alpha | SAMN04487832_102112 | Not Available | - | 505684 - 506742 | 38297.3 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit delta | SAMN04487832_102113 | Not Available | - | 506774 - 506980 | 7350.31 |
| srp54-type protein, gtpase domain | SAMN04487832_102114 | Not Available | - | 507134 - 507793 | 23638.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.