Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_10295 | Not Available | - | 486543 - 488363 | 68519.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_10296 | Not Available | - | 488368 - 488934 | 20977.8 |
| hypothetical protein | SAMN04487832_10297 | Not Available | - | 489391 - 490347 | 34551.6 |
| spermidine/putrescine transport system substrate-binding protein | SAMN04487832_10298 | Not Available | - | 490364 - 491635 | 47981.4 |
| spermidine/putrescine transport system permease protein | SAMN04487832_10299 | Not Available | - | 491632 - 492441 | 30154.0 |
| spermidine/putrescine transport system permease protein | SAMN04487832_102100 | Not Available | - | 492454 - 493260 | 29706.8 |
| spermidine/putrescine transport system atp-binding protein | SAMN04487832_102101 | Not Available | - | 493262 - 494308 | 39210.5 |
| cytidylate kinase | SAMN04487832_102102 | Not Available | - | 494553 - 495176 | 23609.1 |
| phosphoenolpyruvate carboxykinase (gtp) | SAMN04487832_102103 | Not Available | + | 495622 - 497439 | 67386.0 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN04487832_102104 | Not Available | - | 497834 - 499570 | 64245.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.