Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s12 methylthiotransferase | SAMN04487832_10285 | Not Available | - | 475416 - 476747 | 50111.1 |
| regulatory protein | SAMN04487832_10286 | Not Available | - | 476750 - 477385 | 24905.7 |
| recombination protein reca | SAMN04487832_10287 | Not Available | - | 477385 - 478578 | 42689.4 |
| release factor glutamine methyltransferase | SAMN04487832_10288 | Not Available | - | 478578 - 479435 | 31829.0 |
| uncharacterized conserved protein yqhq | SAMN04487832_10289 | Not Available | - | 479429 - 480439 | 37399.0 |
| signal transduction histidine kinase | SAMN04487832_10290 | Not Available | - | 480456 - 481862 | 51323.7 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04487832_10291 | Not Available | - | 481862 - 482563 | 26740.3 |
| hypothetical protein | SAMN04487832_10292 | Not Available | - | 482617 - 483933 | 48001.0 |
| citrate synthase | SAMN04487832_10293 | Not Available | - | 483962 - 485320 | 50784.2 |
| stage ii sporulation protein d | SAMN04487832_10294 | Not Available | + | 485488 - 486501 | 36776.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.