Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhad | SAMN04487832_101287 | Not Available | - | 365673 - 367025 | 48346.0 |
| oligogalacturonide transport system substrate-binding protein | SAMN04487832_101288 | Not Available | - | 367228 - 368493 | 47955.9 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487832_101289 | Not Available | - | 368490 - 369989 | 56112.5 |
| protein of unknown function | SAMN04487832_101290 | Not Available | + | 370395 - 372848 | 90094.3 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | + | 370866 - 371006 | 18.01 |
| hypothetical protein | SAMN04487832_101291 | Not Available | + | 372873 - 373493 | 23072.3 |
| hypothetical protein | SAMN04487832_101292 | Not Available | + | 373505 - 373804 | 10409.2 |
| hypothetical protein | SAMN04487832_1021 | Not Available | - | 374140 - 374300 | 5538.58 |
| dna-binding transcriptional regulator, laci/purr family | SAMN04487832_1022 | Not Available | - | 374558 - 376768 | 83779.3 |
| arabinoxylan arabinofuranohydrolase | SAMN04487832_1023 | Not Available | + | 377433 - 381323 | 140476.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.