Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent iron-only hydrogenase diaphorase component iron-sulfur protein | SAMN04487832_101277 | Not Available | - | 355444 - 355941 | 17871.6 |
| protein of unknown function | SAMN04487832_101278 | Not Available | + | 356614 - 356790 | 6612.94 |
| repeat domain (list_bact_rpt) | SAMN04487832_101279 | Not Available | + | 356835 - 358796 | 71112.4 |
| glutathione peroxidase | SAMN04487832_101280 | Not Available | - | 358845 - 359387 | 20037.8 |
| calcineurin-like phosphoesterase | SAMN04487832_101281 | Not Available | + | 359563 - 361677 | 80181.7 |
| trna a37 threonylcarbamoyladenosine dehydratase | SAMN04487832_101282 | Not Available | - | 361720 - 362484 | 27379.1 |
| uncharacterized membrane protein | SAMN04487832_101283 | Not Available | - | 362541 - 363062 | 18218.7 |
| o-acetylhomoserine (thiol)-lyase | SAMN04487832_101284 | Not Available | - | 363287 - 364570 | 46241.6 |
| act domain-containing protein | SAMN04487832_101285 | Not Available | - | 364677 - 364919 | 8761.92 |
| cytidylate kinase | SAMN04487832_101286 | Not Available | - | 365049 - 365645 | 23172.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.