Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like superfamily protein | SAMN04487832_101257 | Not Available | + | 330467 - 332032 | 57791.6 |
| ybbr domain-containing protein | SAMN04487832_101258 | Not Available | - | 332189 - 333505 | 47555.1 |
| diadenylate cyclase | SAMN04487832_101259 | Not Available | - | 333502 - 334383 | 32806.6 |
| cysteine desulfurase family protein | SAMN04487832_101260 | Not Available | - | 334527 - 335663 | 40616.5 |
| leucine rich repeat-containing protein | SAMN04487832_101261 | Not Available | + | 336079 - 337731 | 60455.8 |
| putative deor family transcriptional regulator, stage iii sporulation protein d | SAMN04487832_101262 | Not Available | - | 338309 - 338587 | 10731.0 |
| hypothetical protein | SAMN04487832_101263 | Not Available | + | 338786 - 339715 | 33888.1 |
| hypothetical protein | SAMN04487832_101264 | Not Available | + | 339788 - 340717 | 34325.6 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN04487832_101265 | Not Available | + | 340893 - 342113 | 45356.9 |
| ld-carboxypeptidase ldcb, las superfamily | SAMN04487832_101266 | Not Available | + | 342484 - 345030 | 88785.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.