Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| stage ii sporulation protein e | SAMN04487832_101249 | Not Available | + | 316110 - 318347 | 78596.2 |
| 1,4-alpha-glucan branching enzyme | SAMN04487832_101250 | Not Available | + | 318534 - 320822 | 86519.9 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 318563 - 318679 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | + | 318731 - 318930 | 18.01 |
| glucose-1-phosphate adenylyltransferase | SAMN04487832_101251 | Not Available | + | 320853 - 322079 | 45234.6 |
| glucose-1-phosphate adenylyltransferase | SAMN04487832_101252 | Not Available | + | 322094 - 323233 | 41894.1 |
| starch synthase | SAMN04487832_101253 | Not Available | + | 323248 - 324666 | 53400.8 |
| phosphotransferase enzyme family protein | SAMN04487832_101254 | Not Available | - | 324753 - 325502 | 28376.9 |
| acetaldehyde dehydrogenase | SAMN04487832_101255 | Not Available | - | 325518 - 328154 | 95570.9 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN04487832_101256 | Not Available | - | 328746 - 330023 | 47204.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.