Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein ycze | SAMN04487832_101239 | Not Available | - | 293652 - 294305 | 23786.2 |
| dna polymerase iv (dinb-like dna polymerase) | SAMN04487832_101240 | Not Available | - | 294400 - 295632 | 46848.3 |
| carbohydrate binding domain-containing protein | SAMN04487832_101241 | Not Available | + | 296206 - 298257 | 73999.5 |
| hypothetical protein | SAMN04487832_101242 | Not Available | + | 298283 - 301525 | 120357.0 |
| leucine rich repeat-containing protein | SAMN04487832_101243 | Not Available | - | 301587 - 308684 | 256164.0 |
| hypothetical protein | SAMN04487832_101244 | Not Available | - | 309053 - 310495 | 54564.0 |
| hypothetical protein | SAMN04487832_101245 | Not Available | - | 310892 - 311101 | 7280.04 |
| hypothetical protein | SAMN04487832_101246 | Not Available | - | 311257 - 313542 | 85623.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487832_101247 | Not Available | - | 313490 - 314065 | 21897.4 |
| flotillin | SAMN04487832_101248 | Not Available | - | 314228 - 315775 | 56153.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.