Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase | SAMN04487832_101231 | Not Available | + | 285520 - 286539 | 38744.9 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04487832_101232 | Not Available | + | 286553 - 287668 | 41236.4 |
| glucose-1-phosphate thymidylyltransferase | SAMN04487832_101233 | Not Available | + | 287705 - 288589 | 32766.4 |
| dtdp-glucose 4,6-dehydratase | SAMN04487832_101234 | Not Available | + | 288600 - 289628 | 39276.0 |
| udp-galactopyranose mutase | SAMN04487832_101235 | Not Available | + | 289632 - 290744 | 42517.2 |
| udp-n-acetylglucosamine/udp-n- acetylgalactosaminediphosphorylase | SAMN04487832_101236 | Not Available | + | 290873 - 292087 | 45255.2 |
| dtdp-glucose 4,6-dehydratase | SAMN04487832_101237 | Not Available | + | 292071 - 293111 | 39684.2 |
| vanz like family protein | SAMN04487832_101238 | Not Available | + | 293192 - 293587 | 15061.8 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 294053 - 294169 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | + | 294221 - 294359 | 18.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.