Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ferrous iron transport protein a | SAMN04487832_101181 | Not Available | + | 223957 - 224175 | 7908.87 |
| ferrous iron transport protein b | SAMN04487832_101182 | Not Available | + | 224229 - 226667 | 88353.2 |
| virus attachment protein p12 family protein | SAMN04487832_101183 | Not Available | + | 226693 - 226854 | 5530.94 |
| protein of unknown function | SAMN04487832_101184 | Not Available | + | 226989 - 228089 | 41959.7 |
| hypothetical protein | SAMN04487832_101185 | Not Available | - | 228433 - 229032 | 22964.9 |
| isopentenyldiphosphate isomerase | SAMN04487832_101186 | Not Available | - | 229174 - 229965 | 30027.3 |
| acyl-coa thioesterase | SAMN04487832_101187 | Not Available | - | 230123 - 230512 | 14160.2 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04487832_101188 | Not Available | - | 230533 - 232422 | 71434.7 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN04487832_101189 | Not Available | + | 232757 - 234391 | 61328.7 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN04487832_101190 | Not Available | - | 234626 - 236752 | 79817.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.