Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitrogenase molybdenum-iron protein beta chain | SAMN04487832_1256 | Not Available | + | 3473637 - 3474968 | 48595.1 |
| ala-trna(pro) deacylase | SAMN04487832_1257 | Not Available | - | 3475105 - 3475650 | 20676.8 |
| fic family protein | SAMN04487832_1258 | Not Available | - | 3475687 - 3476736 | 40229.2 |
| transcriptional regulator, tetr family | SAMN04487832_1259 | Not Available | + | 3477117 - 3477737 | 24183.1 |
| glycosyl transferase family 2 | SAMN04487832_12510 | Not Available | + | 3477734 - 3478465 | 27059.0 |
| cubico group peptidase, beta-lactamase class c family | SAMN04487832_12511 | Not Available | + | 3478483 - 3479964 | 55318.9 |
| cubico group peptidase, beta-lactamase class c family | SAMN04487832_12512 | Not Available | + | 3480236 - 3481231 | 37194.6 |
| resolvase, n terminal domain | SAMN04487832_12513 | Not Available | - | 3481375 - 3481776 | 15506.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04487832_12514 | Not Available | + | 3481918 - 3482862 | 35441.8 |
| cell filamentation protein | SAMN04487832_12515 | Not Available | - | 3483585 - 3484181 | 22835.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.