Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_12433 | Not Available | + | 3466016 - 3466393 | 14549.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04487832_12434 | Not Available | + | 3466390 - 3467100 | 25530.5 |
| caax protease self-immunity | SAMN04487832_12435 | Not Available | + | 3467236 - 3467616 | 13694.9 |
| nitroreductase | SAMN04487832_12436 | Not Available | - | 3468152 - 3468673 | 19483.6 |
| protein of unknown function | SAMN04487832_12437 | Not Available | - | 3468688 - 3468855 | 6344.51 |
| transcriptional regulator, tetr family | SAMN04487832_1251 | Not Available | - | 3468952 - 3469518 | 21571.4 |
| nitt/taut family transport system substrate-binding protein | SAMN04487832_1252 | Not Available | + | 3470064 - 3470996 | 34015.0 |
| nitt/taut family transport system permease protein | SAMN04487832_1253 | Not Available | + | 3471131 - 3472051 | 34058.7 |
| nitrogenase component 1 type oxidoreductase | SAMN04487832_1254 | Not Available | + | 3472070 - 3472714 | 23881.7 |
| nitrogenase component 1 type oxidoreductase | SAMN04487832_1255 | Not Available | + | 3472798 - 3473637 | 31095.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.