Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hpr(ser) kinase/phosphatase | SAMN04487832_12310 | Not Available | + | 3419759 - 3420718 | 36287.3 |
| udp-n-acetylmuramate dehydrogenase | SAMN04487832_12311 | Not Available | + | 3420755 - 3421657 | 32398.0 |
| upf0042 nucleotide-binding protein | SAMN04487832_12312 | Not Available | + | 3421682 - 3422554 | 33434.0 |
| hypothetical protein | SAMN04487832_12313 | Not Available | + | 3422611 - 3423519 | 33915.9 |
| dna polymerase-3 subunit alpha | SAMN04487832_12314 | Not Available | + | 3423516 - 3426929 | 128209.0 |
| 6-phosphofructokinase | SAMN04487832_12315 | Not Available | + | 3427093 - 3428055 | 34091.1 |
| s1 rna binding domain-containing protein | SAMN04487832_12316 | Not Available | - | 3428086 - 3429000 | 33949.0 |
| hypothetical protein | SAMN04487832_12317 | Not Available | - | 3429073 - 3429357 | 10201.2 |
| hypothetical protein | SAMN04487832_12318 | Not Available | + | 3429525 - 3429713 | 7180.02 |
| peptide chain release factor 1 | SAMN04487832_12319 | Not Available | + | 3429762 - 3430835 | 40650.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.