Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like superfamily protein | SAMN04487832_12237 | Not Available | + | 3409920 - 3411035 | 42629.4 |
| cna protein b-type domain-containing protein | SAMN04487832_1231 | Not Available | + | 3411693 - 3412050 | 12153.4 |
| hypothetical protein | SAMN04487832_1232 | Not Available | + | 3412208 - 3412444 | 9288.07 |
| putative pyruvate formate lyase activating enzyme | SAMN04487832_1233 | Not Available | + | 3412419 - 3413339 | 34605.2 |
| mannan endo-1,4-beta-mannosidase | SAMN04487832_1234 | Not Available | - | 3413405 - 3415333 | 71976.7 |
| ribulose-phosphate 3-epimerase | SAMN04487832_1235 | Not Available | + | 3415633 - 3416316 | 24731.9 |
| na+-translocating ferredoxin:nad+ oxidoreductase rnf, rnfd subunit | SAMN04487832_1236 | Not Available | + | 3416310 - 3417293 | 35964.2 |
| electron transport complex protein rnfe | SAMN04487832_1237 | Not Available | + | 3417286 - 3417897 | 22737.5 |
| electron transport complex protein rnfa | SAMN04487832_1238 | Not Available | + | 3417897 - 3418469 | 20845.0 |
| putative glycosyl hydrolase domain-containing protein | SAMN04487832_1239 | Not Available | + | 3418505 - 3419725 | 44628.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.