Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Site-specific integrase | SAMN04487832_1084 | Not Available | + | 1997549 - 1998070 | 19357.0 |
| Putative site-specific recombinase | SAMN04487832_1085 | Not Available | + | 1998025 - 1999173 | 44297.0 |
| Integrase | SAMN04487832_1086 | Not Available | - | 1999254 - 2000810 | 59239.6 |
| Serine recombinase | SAMN04487832_1087 | Not Available | - | 2000798 - 2001223 | 16062.0 |
| Putative site-specific recombinase | SAMN04487832_1088 | Not Available | - | 2001223 - 2002773 | 59290.9 |
| hypothetical protein | SAMN04487832_1089 | Not Available | - | 2002803 - 2002994 | 7393.79 |
| Hsp20 | SAMN04487832_10810 | Not Available | + | 2003209 - 2003652 | 16874.1 |
| Attr | Not Available | Not Available | + | 2003754 - 2003765 | Not Available |
| hypothetical protein | SAMN04487832_10811 | Not Available | + | 2003839 - 2004474 | 24371.5 |
| Endolysin | SAMN04487832_10812 | Not Available | - | 2004529 - 2005707 | 43379.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.