Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_12216 | Not Available | + | 3393503 - 3393787 | 10445.6 |
| uncharacterized conserved protein ykwd, contains cap (csp/antigen 5/pr1) domain | SAMN04487832_12217 | Not Available | - | 3393909 - 3394700 | 29858.8 |
| hypothetical protein | SAMN04487832_12218 | Not Available | + | 3395212 - 3395445 | 9026.16 |
| sigma-70, region 4 | SAMN04487832_12219 | Not Available | + | 3395432 - 3395734 | 11847.4 |
| hypothetical protein | SAMN04487832_12220 | Not Available | - | 3395791 - 3396426 | 24173.6 |
| cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development) | SAMN04487832_12221 | Not Available | - | 3396426 - 3397292 | 32397.7 |
| dna polymerase-3 subunit delta' | SAMN04487832_12222 | Not Available | - | 3397320 - 3398306 | 36064.3 |
| arginine/lysine/ornithine decarboxylase | SAMN04487832_12223 | Not Available | - | 3398325 - 3399650 | 48233.0 |
| hypothetical protein | SAMN04487832_12224 | Not Available | + | 3400233 - 3401003 | 27684.9 |
| stage v sporulation protein s | SAMN04487832_12225 | Not Available | + | 3401126 - 3401386 | 8896.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.