Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. XPD3002 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. XPD3002
Accession NumberFPJT00000000.1
Gene Summary
Adenine Count
1004859 bp
Thymine Count
1005118 bp
Guanine Count
817425 bp
Cytosine Count
810002 bp
Genome Length
3642793 bp
Protein-coding Genes
3109 genes
Non-Coding Genes
138 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487832_12116 | Not Available | + | 3357664 - 3358239 | 23192.6 |
| smi1 / knr4 family (sukh-1) | SAMN04487832_12117 | Not Available | + | 3358328 - 3359638 | 49718.1 |
| hypothetical protein | SAMN04487832_12118 | Not Available | - | 3359842 - 3361035 | 46239.4 |
| hypothetical protein | SAMN04487832_12119 | Not Available | - | 3361056 - 3361562 | 19469.4 |
| hypothetical protein | SAMN04487832_12120 | Not Available | - | 3361559 - 3361819 | 9609.52 |
| type i restriction enzyme, s subunit | SAMN04487832_12121 | Not Available | - | 3361831 - 3363243 | 52635.3 |
| type i restriction enzyme m protein | SAMN04487832_12122 | Not Available | - | 3363240 - 3364655 | 52788.0 |
| type i restriction enzyme, r subunit | SAMN04487832_12123 | Not Available | - | 3364659 - 3367412 | 104687.0 |
| hypothetical protein | SAMN04487832_12124 | Not Available | + | 3367716 - 3369689 | 74490.1 |
| hypothetical protein | SAMN04487832_12125 | Not Available | + | 3369691 - 3370620 | 36679.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.